Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 AC074338.1-201ENST00000416825 156 ntBASIC18.29■□□□□ 0.52
CDKL5O76039 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 SDHAP3-202ENST00000515467 728 ntBASIC18.29■□□□□ 0.52
CDKL5O76039 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC18.29■□□□□ 0.52
CDKL5O76039 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC18.29■□□□□ 0.52
CDKL5O76039 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 AC074044.1-201ENST00000609673 707 ntBASIC18.29■□□□□ 0.52
CDKL5O76039 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL5O76039 AC006538.3-201ENST00000612495 578 ntBASIC18.29■□□□□ 0.52
CDKL5O76039 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL5O76039 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL5O76039 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC18.29■□□□□ 0.52
CDKL5O76039 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL5O76039 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC18.29■□□□□ 0.52
CDKL5O76039 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 STK33-217ENST00000534493 1895 ntTSL 2 BASIC18.29■□□□□ 0.52
CDKL5O76039 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CDKL5O76039 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC18.28■□□□□ 0.52
CDKL5O76039 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDKL5O76039 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDKL5O76039 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CDKL5O76039 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 AL109954.1-202ENST00000564051 2148 ntBASIC18.28■□□□□ 0.52
CDKL5O76039 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC18.28■□□□□ 0.52
CDKL5O76039 RPL5P21-201ENST00000404620 815 ntBASIC18.28■□□□□ 0.52
CDKL5O76039 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL5O76039 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL5O76039 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC18.28■□□□□ 0.52
CDKL5O76039 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC18.28■□□□□ 0.52
CDKL5O76039 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.28■□□□□ 0.52
CDKL5O76039 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC18.28■□□□□ 0.52
CDKL5O76039 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CDKL5O76039 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.28■□□□□ 0.52
CDKL5O76039 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 AC112693.3-201ENST00000624819 1983 ntBASIC18.28■□□□□ 0.52
CDKL5O76039 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CDKL5O76039 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CDKL5O76039 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 C18orf15-201ENST00000623680 2534 ntBASIC18.27■□□□□ 0.52
CDKL5O76039 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC18.27■□□□□ 0.52
CDKL5O76039 HYMAI-201ENST00000635591 3347 ntBASIC18.27■□□□□ 0.52
CDKL5O76039 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDKL5O76039 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC18.27■□□□□ 0.52
CDKL5O76039 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CDKL5O76039 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 MIR943-201ENST00000401286 94 ntBASIC18.27■□□□□ 0.52
CDKL5O76039 TREML5P-201ENST00000421694 576 ntBASIC18.27■□□□□ 0.52
CDKL5O76039 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.27■□□□□ 0.52
CDKL5O76039 AC092580.3-201ENST00000430932 139 ntBASIC18.27■□□□□ 0.52
CDKL5O76039 AC097493.3-201ENST00000509725 367 ntBASIC18.27■□□□□ 0.52
CDKL5O76039 ZNF890P-202ENST00000530367 1156 ntBASIC18.27■□□□□ 0.52
CDKL5O76039 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDKL5O76039 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CDKL5O76039 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.27■□□□□ 0.52
CDKL5O76039 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CDKL5O76039 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CDKL5O76039 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.27■□□□□ 0.52
CDKL5O76039 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.27■□□□□ 0.51
CDKL5O76039 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDKL5O76039 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CDKL5O76039 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CDKL5O76039 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDKL5O76039 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CDKL5O76039 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms