Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFPL1O75677 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.82■□□□□ 0.12
RFPL1O75677 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
RFPL1O75677 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFPL1O75677 SNX18-202ENST00000343017 3140 ntBASIC15.82■□□□□ 0.12
RFPL1O75677 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFPL1O75677 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.82■□□□□ 0.12
RFPL1O75677 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFPL1O75677 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC15.82■□□□□ 0.12
RFPL1O75677 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
RFPL1O75677 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.82■□□□□ 0.12
RFPL1O75677 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFPL1O75677 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.82■□□□□ 0.12
RFPL1O75677 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.82■□□□□ 0.12
RFPL1O75677 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFPL1O75677 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.82■□□□□ 0.12
RFPL1O75677 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
RFPL1O75677 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.81■□□□□ 0.12
RFPL1O75677 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFPL1O75677 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.81■□□□□ 0.12
RFPL1O75677 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
RFPL1O75677 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.81■□□□□ 0.12
RFPL1O75677 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.81■□□□□ 0.12
RFPL1O75677 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 AC069262.1-201ENST00000539058 672 ntBASIC15.81■□□□□ 0.12
RFPL1O75677 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.81■□□□□ 0.12
RFPL1O75677 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.81■□□□□ 0.12
RFPL1O75677 AC093520.2-201ENST00000561830 333 ntBASIC15.81■□□□□ 0.12
RFPL1O75677 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.81■□□□□ 0.12
RFPL1O75677 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.81■□□□□ 0.12
RFPL1O75677 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.81■□□□□ 0.12
RFPL1O75677 AJ011932.1-201ENST00000621707 465 ntBASIC15.81■□□□□ 0.12
RFPL1O75677 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RFPL1O75677 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
RFPL1O75677 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RFPL1O75677 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.8■□□□□ 0.12
RFPL1O75677 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RFPL1O75677 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.8■□□□□ 0.12
RFPL1O75677 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RFPL1O75677 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.8■□□□□ 0.12
RFPL1O75677 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC15.8■□□□□ 0.12
RFPL1O75677 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC15.8■□□□□ 0.12
RFPL1O75677 KRT18P32-201ENST00000424695 1287 ntBASIC15.8■□□□□ 0.12
RFPL1O75677 AL592309.1-201ENST00000443127 649 ntBASIC15.8■□□□□ 0.12
RFPL1O75677 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.8■□□□□ 0.12
RFPL1O75677 VPS29-207ENST00000549970 818 ntTSL 3 BASIC15.8■□□□□ 0.12
RFPL1O75677 RARRES2P8-201ENST00000566335 367 ntBASIC15.8■□□□□ 0.12
RFPL1O75677 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 AC138761.1-201ENST00000584393 385 ntBASIC15.8■□□□□ 0.12
RFPL1O75677 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.8■□□□□ 0.12
RFPL1O75677 AL450472.2-201ENST00000603663 1156 ntBASIC15.8■□□□□ 0.12
RFPL1O75677 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RFPL1O75677 AC026748.1-201ENST00000624349 3251 ntBASIC15.8■□□□□ 0.12
RFPL1O75677 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms