Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC15.84■□□□□ 0.13
GPC4O75487 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.84■□□□□ 0.13
GPC4O75487 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC15.84■□□□□ 0.13
GPC4O75487 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.84■□□□□ 0.13
GPC4O75487 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC15.84■□□□□ 0.13
GPC4O75487 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.84■□□□□ 0.13
GPC4O75487 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.84■□□□□ 0.13
GPC4O75487 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.84■□□□□ 0.13
GPC4O75487 LINC00628-201ENST00000628516 1289 ntBASIC15.84■□□□□ 0.13
GPC4O75487 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC15.84■□□□□ 0.13
GPC4O75487 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
GPC4O75487 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.84■□□□□ 0.13
GPC4O75487 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC15.84■□□□□ 0.13
GPC4O75487 AL691432.1-201ENST00000596308 1422 ntBASIC15.84■□□□□ 0.13
GPC4O75487 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
GPC4O75487 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
GPC4O75487 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC15.84■□□□□ 0.13
GPC4O75487 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
GPC4O75487 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.84■□□□□ 0.13
GPC4O75487 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
GPC4O75487 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
GPC4O75487 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.83■□□□□ 0.13
GPC4O75487 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.83■□□□□ 0.13
GPC4O75487 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GPC4O75487 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GPC4O75487 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.13
GPC4O75487 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
GPC4O75487 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
GPC4O75487 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
GPC4O75487 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.83■□□□□ 0.12
GPC4O75487 TSEN15P1-201ENST00000423257 515 ntBASIC15.83■□□□□ 0.12
GPC4O75487 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.83■□□□□ 0.12
GPC4O75487 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.83■□□□□ 0.12
GPC4O75487 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC15.83■□□□□ 0.12
GPC4O75487 AC109322.1-201ENST00000524499 1264 ntBASIC15.83■□□□□ 0.12
GPC4O75487 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.83■□□□□ 0.12
GPC4O75487 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.83■□□□□ 0.12
GPC4O75487 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
GPC4O75487 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.83■□□□□ 0.12
GPC4O75487 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.83■□□□□ 0.12
GPC4O75487 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
GPC4O75487 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 AP001282.1-201ENST00000531301 1499 ntBASIC15.83■□□□□ 0.12
GPC4O75487 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC15.83■□□□□ 0.12
GPC4O75487 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
GPC4O75487 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GPC4O75487 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
GPC4O75487 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.82■□□□□ 0.12
GPC4O75487 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
GPC4O75487 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC15.82■□□□□ 0.12
GPC4O75487 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
GPC4O75487 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC15.82■□□□□ 0.12
GPC4O75487 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.82■□□□□ 0.12
GPC4O75487 AC069262.1-201ENST00000539058 672 ntBASIC15.82■□□□□ 0.12
GPC4O75487 BANF1P1-201ENST00000553684 263 ntBASIC15.82■□□□□ 0.12
GPC4O75487 NAA38-207ENST00000576861 556 ntTSL 3 BASIC15.82■□□□□ 0.12
GPC4O75487 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC15.82■□□□□ 0.12
GPC4O75487 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.82■□□□□ 0.12
GPC4O75487 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC15.82■□□□□ 0.12
GPC4O75487 GPALPP1-207ENST00000611650 899 ntBASIC15.82■□□□□ 0.12
GPC4O75487 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms