Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 AL109936.8-201ENST00000641772 604 ntBASIC16.35■□□□□ 0.21
LRCH4O75427 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.35■□□□□ 0.21
LRCH4O75427 AC100757.3-201ENST00000622361 1406 ntBASIC16.35■□□□□ 0.21
LRCH4O75427 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
LRCH4O75427 AC023024.2-201ENST00000623561 1993 ntBASIC16.35■□□□□ 0.21
LRCH4O75427 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRCH4O75427 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRCH4O75427 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 AMT-224ENST00000635808 1610 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH4O75427 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH4O75427 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCH4O75427 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.34■□□□□ 0.21
LRCH4O75427 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCH4O75427 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC16.34■□□□□ 0.21
LRCH4O75427 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC16.34■□□□□ 0.21
LRCH4O75427 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.34■□□□□ 0.21
LRCH4O75427 AC015922.1-201ENST00000421102 1152 ntBASIC16.34■□□□□ 0.21
LRCH4O75427 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
LRCH4O75427 PMS2P2-201ENST00000425039 1128 ntBASIC16.34■□□□□ 0.21
LRCH4O75427 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH4O75427 ZNF890P-202ENST00000530367 1156 ntBASIC16.34■□□□□ 0.21
LRCH4O75427 DUX4L27-201ENST00000554796 1261 ntBASIC16.34■□□□□ 0.21
LRCH4O75427 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH4O75427 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH4O75427 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH4O75427 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRCH4O75427 AP002414.2-201ENST00000591780 3365 ntBASIC16.34■□□□□ 0.21
LRCH4O75427 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRCH4O75427 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.34■□□□□ 0.21
LRCH4O75427 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRCH4O75427 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH4O75427 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH4O75427 AC148477.4-201ENST00000613430 1793 ntBASIC16.33■□□□□ 0.21
LRCH4O75427 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
LRCH4O75427 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH4O75427 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH4O75427 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH4O75427 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRCH4O75427 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LRCH4O75427 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LRCH4O75427 MIR943-201ENST00000401286 94 ntBASIC16.33■□□□□ 0.2
LRCH4O75427 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.33■□□□□ 0.2
LRCH4O75427 TSSK5P-201ENST00000423978 907 ntBASIC16.33■□□□□ 0.2
LRCH4O75427 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.33■□□□□ 0.2
LRCH4O75427 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
LRCH4O75427 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC16.33■□□□□ 0.2
LRCH4O75427 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.33■□□□□ 0.2
LRCH4O75427 AC044860.1-202ENST00000559481 777 ntBASIC16.33■□□□□ 0.2
LRCH4O75427 AC015910.1-201ENST00000579400 975 ntBASIC16.33■□□□□ 0.2
LRCH4O75427 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.33■□□□□ 0.2
LRCH4O75427 AL590560.3-201ENST00000623350 461 ntBASIC16.33■□□□□ 0.2
LRCH4O75427 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
LRCH4O75427 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
LRCH4O75427 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
LRCH4O75427 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRCH4O75427 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms