Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1FO60840 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1FO60840 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1FO60840 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 AL157414.3-201ENST00000624276 1954 ntBASIC19.41■□□□□ 0.7
CACNA1FO60840 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1FO60840 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1FO60840 BOLA2P3-201ENST00000404566 256 ntBASIC19.41■□□□□ 0.7
CACNA1FO60840 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CACNA1FO60840 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1FO60840 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CACNA1FO60840 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CACNA1FO60840 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1FO60840 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
CACNA1FO60840 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1FO60840 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1FO60840 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
CACNA1FO60840 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CACNA1FO60840 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1FO60840 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
CACNA1FO60840 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC19.41■□□□□ 0.7
CACNA1FO60840 AC073413.1-201ENST00000603927 732 ntBASIC19.41■□□□□ 0.7
CACNA1FO60840 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC19.41■□□□□ 0.7
CACNA1FO60840 REXO1L2P-201ENST00000425429 2069 ntBASIC19.41■□□□□ 0.7
CACNA1FO60840 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CACNA1FO60840 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC19.41■□□□□ 0.7
CACNA1FO60840 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 AC006486.2-201ENST00000624246 2199 ntBASIC19.4■□□□□ 0.7
CACNA1FO60840 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1FO60840 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1FO60840 MIR1202-201ENST00000408529 83 ntBASIC19.4■□□□□ 0.7
CACNA1FO60840 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1FO60840 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CACNA1FO60840 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC19.4■□□□□ 0.7
CACNA1FO60840 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1FO60840 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC19.4■□□□□ 0.7
CACNA1FO60840 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC19.4■□□□□ 0.7
CACNA1FO60840 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC19.4■□□□□ 0.7
CACNA1FO60840 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1FO60840 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CACNA1FO60840 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC19.4■□□□□ 0.7
CACNA1FO60840 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
CACNA1FO60840 PCDHGB8P-201ENST00000502926 1973 ntBASIC19.4■□□□□ 0.7
CACNA1FO60840 AC138035.3-201ENST00000622706 2791 ntBASIC19.4■□□□□ 0.7
CACNA1FO60840 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1FO60840 CELP-203ENST00000624767 2414 ntTSL 5 BASIC19.39■□□□□ 0.7
CACNA1FO60840 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1FO60840 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC19.39■□□□□ 0.7
CACNA1FO60840 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1FO60840 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.39■□□□□ 0.7
CACNA1FO60840 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1FO60840 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1FO60840 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.39■□□□□ 0.7
CACNA1FO60840 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
CACNA1FO60840 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC19.39■□□□□ 0.7
CACNA1FO60840 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.39■□□□□ 0.7
CACNA1FO60840 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CACNA1FO60840 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC19.39■□□□□ 0.7
CACNA1FO60840 AL162727.3-201ENST00000635661 2787 ntBASIC19.39■□□□□ 0.69
CACNA1FO60840 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNA1FO60840 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CACNA1FO60840 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CACNA1FO60840 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC19.39■□□□□ 0.69
CACNA1FO60840 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 PES1-204ENST00000402284 2144 ntTSL 5 BASIC19.39■□□□□ 0.69
CACNA1FO60840 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CACNA1FO60840 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms