Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC12.9□□□□□ -0.34
SSSCA1O60232 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
SSSCA1O60232 AC136632.2-201ENST00000512891 861 ntBASIC12.9□□□□□ -0.34
SSSCA1O60232 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.9□□□□□ -0.34
SSSCA1O60232 AC008667.4-201ENST00000607370 168 ntBASIC12.9□□□□□ -0.34
SSSCA1O60232 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
SSSCA1O60232 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.9□□□□□ -0.34
SSSCA1O60232 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
SSSCA1O60232 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC12.9□□□□□ -0.34
SSSCA1O60232 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.9□□□□□ -0.34
SSSCA1O60232 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
SSSCA1O60232 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
SSSCA1O60232 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
SSSCA1O60232 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
SSSCA1O60232 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.35
SSSCA1O60232 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 AC005840.4-201ENST00000541242 2494 ntBASIC12.89□□□□□ -0.35
SSSCA1O60232 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
SSSCA1O60232 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC12.89□□□□□ -0.35
SSSCA1O60232 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC12.89□□□□□ -0.35
SSSCA1O60232 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.89□□□□□ -0.35
SSSCA1O60232 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 AC015656.1-201ENST00000624209 3578 ntBASIC12.89□□□□□ -0.35
SSSCA1O60232 SLC12A5-211ENST00000616933 6166 ntTSL 5 BASIC12.89□□□□□ -0.35
SSSCA1O60232 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.89□□□□□ -0.35
SSSCA1O60232 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.89□□□□□ -0.35
SSSCA1O60232 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC12.89□□□□□ -0.35
SSSCA1O60232 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 KRT18P34-201ENST00000488218 1270 ntBASIC12.89□□□□□ -0.35
SSSCA1O60232 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.89□□□□□ -0.35
SSSCA1O60232 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.89□□□□□ -0.35
SSSCA1O60232 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC12.89□□□□□ -0.35
SSSCA1O60232 ACTL9-202ENST00000612068 1252 ntBASIC12.89□□□□□ -0.35
SSSCA1O60232 AC107918.4-202ENST00000641623 219 ntBASIC12.89□□□□□ -0.35
SSSCA1O60232 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.89□□□□□ -0.35
SSSCA1O60232 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC12.89□□□□□ -0.35
SSSCA1O60232 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
SSSCA1O60232 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 STK33-217ENST00000534493 1895 ntTSL 2 BASIC12.89□□□□□ -0.35
SSSCA1O60232 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
SSSCA1O60232 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC12.88□□□□□ -0.35
SSSCA1O60232 AL589702.1-201ENST00000641229 1509 ntBASIC12.88□□□□□ -0.35
SSSCA1O60232 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC12.88□□□□□ -0.35
SSSCA1O60232 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
SSSCA1O60232 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC12.88□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms