Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
TRAF3IP2O43734 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAF3IP2O43734 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC055876.3-201ENST00000431496 288 ntBASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC009477.1-201ENST00000452936 217 ntBASIC14.02□□□□□ -0.17
TRAF3IP2O43734 SDHAP3-202ENST00000515467 728 ntBASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC044860.1-202ENST00000559481 777 ntBASIC14.02□□□□□ -0.17
TRAF3IP2O43734 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AL390955.2-201ENST00000603032 514 ntBASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC138649.4-201ENST00000612222 287 ntBASIC14.02□□□□□ -0.17
TRAF3IP2O43734 HADH-212ENST00000638621 741 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC013268.4-201ENST00000637413 2228 ntBASIC14.02□□□□□ -0.17
TRAF3IP2O43734 AC104640.1-201ENST00000562617 2109 ntBASIC14.02□□□□□ -0.17
TRAF3IP2O43734 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAF3IP2O43734 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 KRT18P64-201ENST00000434946 1219 ntBASIC14.01□□□□□ -0.17
TRAF3IP2O43734 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 LINC01115-203ENST00000606068 577 ntBASIC14.01□□□□□ -0.17
TRAF3IP2O43734 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.01□□□□□ -0.17
TRAF3IP2O43734 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms