Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TNRC18O15417 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 Z82185.1-201ENST00000417792 549 ntTSL 4 BASIC16.47■□□□□ 0.23
TNRC18O15417 AC006328.1-201ENST00000437571 379 ntBASIC16.47■□□□□ 0.23
TNRC18O15417 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC16.47■□□□□ 0.23
TNRC18O15417 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.47■□□□□ 0.23
TNRC18O15417 LINC01082-201ENST00000601250 441 ntTSL 2 BASIC16.47■□□□□ 0.23
TNRC18O15417 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TNRC18O15417 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC16.47■□□□□ 0.23
TNRC18O15417 PGAP2-207ENST00000463452 931 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TNRC18O15417 RN7SL69P-201ENST00000468423 272 ntBASIC16.47■□□□□ 0.23
TNRC18O15417 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC16.47■□□□□ 0.23
TNRC18O15417 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.47■□□□□ 0.23
TNRC18O15417 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.47■□□□□ 0.23
TNRC18O15417 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC16.47■□□□□ 0.23
TNRC18O15417 ACTG1P19-201ENST00000418987 1116 ntBASIC16.47■□□□□ 0.23
TNRC18O15417 OR51A9P-201ENST00000422578 911 ntBASIC16.47■□□□□ 0.23
TNRC18O15417 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
TNRC18O15417 TPT1P6-201ENST00000458298 514 ntBASIC16.47■□□□□ 0.23
TNRC18O15417 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC16.47■□□□□ 0.23
TNRC18O15417 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TNRC18O15417 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 AC009113.1-201ENST00000570267 2443 ntBASIC16.46■□□□□ 0.23
TNRC18O15417 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TNRC18O15417 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC16.46■□□□□ 0.23
TNRC18O15417 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.46■□□□□ 0.23
TNRC18O15417 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC16.46■□□□□ 0.23
TNRC18O15417 OR2A1-AS1-210ENST00000496968 531 ntBASIC16.46■□□□□ 0.23
TNRC18O15417 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC16.46■□□□□ 0.23
TNRC18O15417 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TNRC18O15417 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.46■□□□□ 0.23
TNRC18O15417 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.46■□□□□ 0.23
TNRC18O15417 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 AC021305.1-201ENST00000520656 1514 ntBASIC16.46■□□□□ 0.23
TNRC18O15417 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
TNRC18O15417 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
TNRC18O15417 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TNRC18O15417 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.46■□□□□ 0.23
TNRC18O15417 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TNRC18O15417 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TNRC18O15417 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TNRC18O15417 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.46■□□□□ 0.23
TNRC18O15417 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.46■□□□□ 0.23
TNRC18O15417 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TNRC18O15417 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC16.46■□□□□ 0.23
TNRC18O15417 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TNRC18O15417 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.46■□□□□ 0.22
TNRC18O15417 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 AL645937.2-201ENST00000396808 931 ntBASIC16.45■□□□□ 0.22
TNRC18O15417 ATP5J-204ENST00000400093 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 AC108734.2-201ENST00000420887 1069 ntBASIC16.45■□□□□ 0.22
TNRC18O15417 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC16.45■□□□□ 0.22
TNRC18O15417 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC16.45■□□□□ 0.22
TNRC18O15417 RNA5SP417-201ENST00000516459 108 ntBASIC16.45■□□□□ 0.22
TNRC18O15417 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC16.45■□□□□ 0.22
TNRC18O15417 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TNRC18O15417 AC100827.2-201ENST00000563214 1194 ntBASIC16.45■□□□□ 0.22
TNRC18O15417 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC16.45■□□□□ 0.22
TNRC18O15417 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC16.45■□□□□ 0.22
TNRC18O15417 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.45■□□□□ 0.22
TNRC18O15417 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC16.45■□□□□ 0.22
TNRC18O15417 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TNRC18O15417 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms