Protein–RNA interactions for Protein: O15016

TRIM66, Tripartite motif-containing protein 66, humanhuman

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM66O15016 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM66O15016 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM66O15016 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 AC023157.3-201ENST00000619086 2088 ntBASIC17.14■□□□□ 0.33
TRIM66O15016 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRIM66O15016 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRIM66O15016 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM66O15016 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM66O15016 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRIM66O15016 AC100757.3-201ENST00000622361 1406 ntBASIC17.13■□□□□ 0.33
TRIM66O15016 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM66O15016 CICP20-201ENST00000443330 2801 ntBASIC17.13■□□□□ 0.33
TRIM66O15016 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
TRIM66O15016 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 HNRNPA1P40-201ENST00000426371 1278 ntBASIC17.13■□□□□ 0.33
TRIM66O15016 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM66O15016 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM66O15016 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM66O15016 MIR3197-201ENST00000582241 73 ntBASIC17.13■□□□□ 0.33
TRIM66O15016 MIR4321-201ENST00000592276 80 ntBASIC17.13■□□□□ 0.33
TRIM66O15016 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM66O15016 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM66O15016 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM66O15016 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM66O15016 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM66O15016 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
TRIM66O15016 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM66O15016 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM66O15016 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM66O15016 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM66O15016 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM66O15016 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM66O15016 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM66O15016 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM66O15016 RBM39-205ENST00000397370 612 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM66O15016 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM66O15016 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM66O15016 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM66O15016 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM66O15016 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.12■□□□□ 0.33
TRIM66O15016 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC17.12■□□□□ 0.33
TRIM66O15016 ACTG1P22-201ENST00000603793 1099 ntBASIC17.12■□□□□ 0.33
TRIM66O15016 AL133215.2-201ENST00000609242 977 ntBASIC17.12■□□□□ 0.33
TRIM66O15016 AL590560.3-201ENST00000623350 461 ntBASIC17.12■□□□□ 0.33
TRIM66O15016 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM66O15016 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
TRIM66O15016 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM66O15016 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms