Protein–RNA interactions for Protein: O14647

CHD2, Chromodomain-helicase-DNA-binding protein 2, humanhuman

Known RBP Predictions only

Length 1,828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2O14647 AC069224.1-201ENST00000566372 1715 ntBASIC21.24■□□□□ 0.99
CHD2O14647 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHD2O14647 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD2O14647 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC21.24■□□□□ 0.99
CHD2O14647 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CHD2O14647 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD2O14647 TKT-202ENST00000423516 2075 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD2O14647 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD2O14647 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD2O14647 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
CHD2O14647 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD2O14647 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD2O14647 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC21.24■□□□□ 0.99
CHD2O14647 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHD2O14647 FOS-204ENST00000554617 796 ntTSL 2 BASIC21.24■□□□□ 0.99
CHD2O14647 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC21.24■□□□□ 0.99
CHD2O14647 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC21.24■□□□□ 0.99
CHD2O14647 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
CHD2O14647 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD2O14647 AC074138.1-201ENST00000611182 1303 ntBASIC21.24■□□□□ 0.99
CHD2O14647 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHD2O14647 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 SOD2-202ENST00000367054 815 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD2O14647 AK6-201ENST00000380818 1183 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD2O14647 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC21.23■□□□□ 0.99
CHD2O14647 FAM58BP-201ENST00000439056 645 ntBASIC21.23■□□□□ 0.99
CHD2O14647 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC21.23■□□□□ 0.99
CHD2O14647 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CHD2O14647 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC21.23■□□□□ 0.99
CHD2O14647 MIR4649-201ENST00000582839 64 ntBASIC21.23■□□□□ 0.99
CHD2O14647 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC21.23■□□□□ 0.99
CHD2O14647 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC21.23■□□□□ 0.99
CHD2O14647 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CHD2O14647 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
CHD2O14647 AC138696.2-201ENST00000607376 223 ntBASIC21.23■□□□□ 0.99
CHD2O14647 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC21.23■□□□□ 0.99
CHD2O14647 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC21.23■□□□□ 0.99
CHD2O14647 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
CHD2O14647 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD2O14647 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 KLF2P1-201ENST00000447438 1042 ntBASIC21.22■□□□□ 0.99
CHD2O14647 AP002803.1-201ENST00000528836 498 ntBASIC21.22■□□□□ 0.99
CHD2O14647 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC21.22■□□□□ 0.99
CHD2O14647 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC21.22■□□□□ 0.99
CHD2O14647 AC100827.2-201ENST00000563214 1194 ntBASIC21.22■□□□□ 0.99
CHD2O14647 DUX4L46-201ENST00000566845 751 ntBASIC21.22■□□□□ 0.99
CHD2O14647 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
CHD2O14647 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC21.22■□□□□ 0.99
CHD2O14647 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC21.22■□□□□ 0.99
CHD2O14647 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC21.22■□□□□ 0.99
CHD2O14647 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
CHD2O14647 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CHD2O14647 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHD2O14647 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
CHD2O14647 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC21.21■□□□□ 0.99
CHD2O14647 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD2O14647 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHD2O14647 SP100-205ENST00000409824 1802 ntTSL 5 BASIC21.21■□□□□ 0.99
CHD2O14647 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD2O14647 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC21.21■□□□□ 0.99
CHD2O14647 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC21.21■□□□□ 0.99
CHD2O14647 CDC23-208ENST00000505120 455 ntTSL 3 BASIC21.21■□□□□ 0.99
CHD2O14647 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD2O14647 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC21.21■□□□□ 0.99
CHD2O14647 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CHD2O14647 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
CHD2O14647 AC011840.2-201ENST00000563063 1520 ntBASIC21.21■□□□□ 0.99
CHD2O14647 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
CHD2O14647 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CHD2O14647 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
CHD2O14647 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms