Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC12.64□□□□□ -0.39
UPK2O00526 CEND1P1-201ENST00000451006 455 ntBASIC12.64□□□□□ -0.39
UPK2O00526 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC12.64□□□□□ -0.39
UPK2O00526 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 ALG1L8P-201ENST00000533887 760 ntBASIC12.64□□□□□ -0.39
UPK2O00526 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC12.64□□□□□ -0.39
UPK2O00526 AC105021.1-202ENST00000570572 669 ntBASIC12.64□□□□□ -0.39
UPK2O00526 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.64□□□□□ -0.39
UPK2O00526 AC022145.2-201ENST00000598203 171 ntBASIC12.64□□□□□ -0.39
UPK2O00526 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 STRN-202ENST00000379213 2254 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
UPK2O00526 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
UPK2O00526 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
UPK2O00526 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
UPK2O00526 AGAP7P-201ENST00000582299 2062 ntBASIC12.63□□□□□ -0.39
UPK2O00526 AGAP14-201ENST00000624701 2060 ntBASIC12.63□□□□□ -0.39
UPK2O00526 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.63□□□□□ -0.39
UPK2O00526 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC12.63□□□□□ -0.39
UPK2O00526 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK2O00526 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC12.63□□□□□ -0.39
UPK2O00526 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
UPK2O00526 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
UPK2O00526 RBM39-205ENST00000397370 612 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK2O00526 FO393414.2-201ENST00000405153 598 ntBASIC12.63□□□□□ -0.39
UPK2O00526 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC12.63□□□□□ -0.39
UPK2O00526 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC12.63□□□□□ -0.39
UPK2O00526 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.63□□□□□ -0.39
UPK2O00526 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC12.63□□□□□ -0.39
UPK2O00526 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 PUS1-205ENST00000535067 838 ntTSL 3 BASIC12.63□□□□□ -0.39
UPK2O00526 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK2O00526 AC005829.1-201ENST00000570002 483 ntBASIC12.63□□□□□ -0.39
UPK2O00526 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK2O00526 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.63□□□□□ -0.39
UPK2O00526 AC018529.1-201ENST00000613063 361 ntBASIC12.63□□□□□ -0.39
UPK2O00526 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 LINC02228-204ENST00000642115 2962 ntBASIC12.63□□□□□ -0.39
UPK2O00526 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
UPK2O00526 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.63□□□□□ -0.39
UPK2O00526 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK2O00526 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.63□□□□□ -0.39
UPK2O00526 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.63□□□□□ -0.39
UPK2O00526 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
UPK2O00526 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms