Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC16.79■□□□□ 0.28
O00370 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC16.79■□□□□ 0.28
O00370 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.79■□□□□ 0.28
O00370 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
O00370 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
O00370 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
O00370 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 AC022144.1-201ENST00000602255 1580 ntBASIC16.78■□□□□ 0.28
O00370 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
O00370 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
O00370 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.78■□□□□ 0.28
O00370 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
O00370 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.78■□□□□ 0.28
O00370 AC074044.1-201ENST00000609673 707 ntBASIC16.78■□□□□ 0.28
O00370 AC008738.7-201ENST00000609744 511 ntBASIC16.78■□□□□ 0.28
O00370 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.78■□□□□ 0.28
O00370 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 TNRC18P2-201ENST00000417666 2714 ntBASIC16.78■□□□□ 0.28
O00370 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.78■□□□□ 0.28
O00370 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.78■□□□□ 0.28
O00370 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
O00370 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
O00370 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
O00370 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
O00370 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
O00370 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC16.77■□□□□ 0.28
O00370 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.77■□□□□ 0.28
O00370 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.77■□□□□ 0.28
O00370 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.77■□□□□ 0.28
O00370 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.77■□□□□ 0.28
O00370 RPL13P2-201ENST00000440687 659 ntBASIC16.77■□□□□ 0.28
O00370 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC16.77■□□□□ 0.28
O00370 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC16.77■□□□□ 0.28
O00370 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.77■□□□□ 0.28
O00370 AL355385.1-201ENST00000606123 409 ntBASIC16.77■□□□□ 0.28
O00370 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.77■□□□□ 0.28
O00370 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
O00370 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
O00370 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
O00370 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
O00370 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
O00370 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
O00370 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
O00370 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
O00370 ILF3-AS1-201ENST00000591501 1983 ntBASIC16.77■□□□□ 0.27
O00370 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.77■□□□□ 0.27
O00370 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 AC020658.6-201ENST00000623564 1870 ntBASIC16.76■□□□□ 0.27
O00370 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.76■□□□□ 0.27
O00370 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 BTBD7P1-201ENST00000447253 1453 ntBASIC16.76■□□□□ 0.27
O00370 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.76■□□□□ 0.27
O00370 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
O00370 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms