Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 KLK8-202ENST00000320838 456 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 FXN-203ENST00000396366 922 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 HNRNPUP1-201ENST00000554987 333 ntBASIC11.08□□□□□ -0.64
LINC01546A6NGU7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 IRF8-202ENST00000562492 946 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 CYB561-216ENST00000582297 897 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 IL11-204ENST00000590625 1028 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 AC016397.2-201ENST00000624848 1985 ntBASIC11.08□□□□□ -0.64
LINC01546A6NGU7 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 AL122018.1-201ENST00000446607 2310 ntBASIC11.08□□□□□ -0.64
LINC01546A6NGU7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
LINC01546A6NGU7 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.07□□□□□ -0.64
LINC01546A6NGU7 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 AC073621.1-201ENST00000392730 636 ntBASIC11.07□□□□□ -0.64
LINC01546A6NGU7 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 AC092474.2-201ENST00000424288 719 ntBASIC11.07□□□□□ -0.64
LINC01546A6NGU7 DUX4L26-201ENST00000489078 1255 ntBASIC11.07□□□□□ -0.64
LINC01546A6NGU7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 OR7E47P-204ENST00000575924 449 ntBASIC11.07□□□□□ -0.64
LINC01546A6NGU7 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
LINC01546A6NGU7 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms