Protein–RNA interactions for Protein: A6NDR6

MEIS3P1, Putative homeobox protein Meis3-like 1, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3P1A6NDR6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.57□□□□□ -0.24
MEIS3P1A6NDR6 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
MEIS3P1A6NDR6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MEIS3P1A6NDR6 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
MEIS3P1A6NDR6 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 COPS8-203ENST00000409334 794 ntTSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 PMS2P4-201ENST00000412466 1052 ntBASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 KRT18P27-201ENST00000427733 1299 ntBASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 RPS2P1-201ENST00000434010 821 ntBASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 OR7E47P-204ENST00000575924 449 ntBASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
MEIS3P1A6NDR6 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 MRPL20P1-201ENST00000400819 433 ntBASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
MEIS3P1A6NDR6 IGHV3-65-201ENST00000523210 341 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms