Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 CD7-202ENST00000578509 925 ntTSL 3 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 AC024267.1-201ENST00000582320 895 ntBASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
TCRBV3S1A0A5B6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 AP002414.3-201ENST00000589352 1468 ntBASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 SAPCD2P3-201ENST00000455031 850 ntBASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 AF238378.1-201ENST00000526806 358 ntBASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 HNRNPUP1-201ENST00000554987 333 ntBASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 CLEC4GP1-201ENST00000596555 870 ntBASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 AL121772.3-201ENST00000610840 674 ntBASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 AL136982.4-201ENST00000437689 1740 ntBASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 AC015656.1-201ENST00000624209 3578 ntBASIC14.72□□□□□ -0.05
TCRBV3S1A0A5B6 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 PCDHA3-202ENST00000532566 4594 ntBASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 AC152010.1-201ENST00000415779 2006 ntBASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 AP000845.1-201ENST00000581677 2131 ntBASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 OR2I1P-210ENST00000642037 4691 ntBASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.71□□□□□ -0.05
TCRBV3S1A0A5B6 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms