Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ARHGEF2-206ENST00000462460 4438 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ILF3-AS1-201ENST00000591501 1983 ntBASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 KRT17P1-201ENST00000399211 1546 ntBASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 CRK-204ENST00000574295 1391 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 CTCFL-218ENST00000608440 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 TBC1D3P2-202ENST00000577902 1649 ntBASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC8.07□□□□□ -1.12
LINC01558Q9Y6Z2 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AC024075.2-201ENST00000598112 1473 ntBASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 DCAF11-204ENST00000446197 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 FAM76A-204ENST00000373954 3567 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AC099791.1-201ENST00000416440 715 ntBASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AC239859.2-201ENST00000444165 318 ntBASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 HDAC7-203ENST00000380610 3261 ntAPPRIS ALT2 TSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 UBTFL8-201ENST00000426903 2112 ntBASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC8.06□□□□□ -1.12
LINC01558Q9Y6Z2 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 62.1 ms