Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 HNRNPUP1-201ENST00000554987 333 ntBASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 AC097359.3-201ENST00000603982 1210 ntBASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 AP000720.1-201ENST00000625091 483 ntBASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDHB13Q9Y5F0 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 AC092580.3-201ENST00000430932 139 ntBASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 AC106028.4-201ENST00000614509 607 ntBASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 MYB-201ENST00000316528 3571 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 MYB-241ENST00000616088 3573 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDHB13Q9Y5F0 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC087499.5-201ENST00000452760 1342 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC092850.2-201ENST00000623821 2697 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 MTATP6P17-201ENST00000431030 672 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC055876.3-201ENST00000431496 288 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AL353718.1-201ENST00000451028 517 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AL158211.1-201ENST00000566763 763 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC138649.4-201ENST00000612222 287 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC093512.1-201ENST00000617969 520 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 AC020763.2-201ENST00000623155 1255 ntBASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDHB13Q9Y5F0 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms