Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 AC009090.5-201ENST00000624886 2285 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 AC087481.3-201ENST00000602886 1894 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 AP001282.1-201ENST00000531301 1499 ntBASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
RHBDD3Q9Y3P4 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 SSH2-211ENST00000590153 570 ntTSL 4 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 CICP24-201ENST00000605464 2705 ntBASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
RHBDD3Q9Y3P4 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 FAM220BP-201ENST00000377689 816 ntBASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 AC069335.1-201ENST00000489972 472 ntBASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 PUS1-205ENST00000535067 838 ntTSL 3 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 SLC25A39P2-201ENST00000537614 270 ntBASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
RHBDD3Q9Y3P4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms