Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 PHKG1P2-201ENST00000457537 863 ntBASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 AL450472.2-201ENST00000603663 1156 ntBASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 AC026979.3-201ENST00000607315 403 ntBASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 NORAD-201ENST00000565493 5339 ntBASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RNF11Q9Y3C5 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC15.39■□□□□ 0.06
RNF11Q9Y3C5 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.06
RNF11Q9Y3C5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 AC007191.1-201ENST00000623179 2995 ntBASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 AC139749.1-202ENST00000617529 3139 ntBASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 RPSAP43-201ENST00000402237 625 ntBASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
RNF11Q9Y3C5 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 NFIC-211ENST00000641145 8399 ntBASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 EEF1DP4-201ENST00000446006 880 ntBASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 MIR3687-2-201ENST00000577708 61 ntBASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 MIR3687-1-201ENST00000614492 61 ntBASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC15.38■□□□□ 0.05
RNF11Q9Y3C5 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms