Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 RN7SL618P-201ENST00000477850 296 ntBASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 AP005018.1-201ENST00000525475 301 ntBASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 CR383656.12-201ENST00000549567 513 ntBASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 AC067930.6-201ENST00000623257 4947 ntBASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RPH3AQ9Y2J0 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 CDC14C-201ENST00000428251 1719 ntBASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 AP001282.1-201ENST00000531301 1499 ntBASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC14.52□□□□□ -0.08
RPH3AQ9Y2J0 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 UGT1A2P-201ENST00000454886 866 ntBASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 SERBP1P3-201ENST00000459980 809 ntBASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 LINC02447-202ENST00000501888 2146 ntBASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 COX11-202ENST00000571584 1108 ntTSL 2 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 AC008761.3-201ENST00000624803 892 ntBASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 AC069224.1-201ENST00000566372 1715 ntBASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
RPH3AQ9Y2J0 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 PRAL-201ENST00000624952 3286 ntBASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RPH3AQ9Y2J0 AC087499.5-201ENST00000452760 1342 ntBASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms