Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC112484.2-201ENST00000498297 1298 ntTSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC138701.2-201ENST00000553634 226 ntBASIC6.21□□□□□ -1.42
MACF1Q9UPN3 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC022001.3-201ENST00000606330 596 ntBASIC6.21□□□□□ -1.42
MACF1Q9UPN3 MIR6165-201ENST00000614803 84 ntBASIC6.21□□□□□ -1.42
MACF1Q9UPN3 LINC01451-201ENST00000623792 534 ntBASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC000078.1-201ENST00000420617 682 ntBASIC6.21□□□□□ -1.42
MACF1Q9UPN3 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 RPL30-213ENST00000523172 274 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 MBP-230ENST00000528160 584 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
MACF1Q9UPN3 AC009093.2-202ENST00000620513 2079 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AL031731.1-201ENST00000642131 2094 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AC090136.2-201ENST00000517809 420 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 LINC01002-234ENST00000633808 848 ntTSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 MST1L-201ENST00000442552 2185 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 KLK3-216ENST00000617027 1341 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AL158070.2-201ENST00000623713 1621 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 RPSAP15-201ENST00000448168 861 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AC025419.1-201ENST00000537250 690 ntTSL 3 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 EEF1AKMT3-203ENST00000548256 561 ntTSL 4 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 EFS-203ENST00000429593 2610 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 TPRKB-203ENST00000409716 816 ntTSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 RN7SL23P-201ENST00000484055 275 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 ABCD1P3-201ENST00000562927 605 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 GUSBP10-201ENST00000417412 665 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 KLF2P1-201ENST00000447438 1042 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AC024405.2-201ENST00000528459 810 ntTSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AC100827.2-201ENST00000563214 1194 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 LCN12-202ENST00000371633 579 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC6.2□□□□□ -1.42
MACF1Q9UPN3 AP000533.1-201ENST00000456143 1177 ntBASIC6.2□□□□□ -1.42
MACF1Q9UPN3 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms