Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
PCDHA4Q9UN74 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 AC022532.1-201ENST00000624563 1728 ntBASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 AC236430.1-201ENST00000402231 743 ntBASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.92■□□□□ 0.46
PCDHA4Q9UN74 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 AC112693.3-201ENST00000624819 1983 ntBASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 CLK3P2-201ENST00000427566 1453 ntBASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 NME2-201ENST00000393183 568 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 AC093004.1-201ENST00000508850 424 ntBASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 AC092384.3-202ENST00000564646 2873 ntBASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
PCDHA4Q9UN74 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHA4Q9UN74 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms