Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 FAM8A3P-201ENST00000427218 844 ntBASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 MEIS3P1-201ENST00000495167 958 ntBASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 SPDYE18-201ENST00000510091 1050 ntBASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 AC027796.2-201ENST00000575326 344 ntBASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.56■□□□□ 0.24
PCDHGC3Q9UN70 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 SSR1P1-201ENST00000407630 814 ntBASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 TBCB-211ENST00000589996 724 ntTSL 3 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 AC005786.4-201ENST00000623369 682 ntBASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
PCDHGC3Q9UN70 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 AL589987.1-201ENST00000453380 819 ntBASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 RHOA-206ENST00000454011 889 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 RNA5SP421-201ENST00000516864 134 ntBASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PCDHGC3Q9UN70 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms