Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC067863.1-201ENST00000494933 530 ntBASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 ALG1L8P-201ENST00000533887 760 ntBASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 SLC25A39P2-201ENST00000537614 270 ntBASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 RARRES2P9-201ENST00000565168 469 ntBASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 METTL23-205ENST00000588302 925 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC139749.1-202ENST00000617529 3139 ntBASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC107918.4-201ENST00000641966 3141 ntBASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC10.37□□□□□ -0.75
LINC00474Q9P2X8 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 RBPMS2P1-201ENST00000437762 623 ntBASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC00474Q9P2X8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms