Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 AL359881.2-201ENST00000602973 570 ntBASIC14.46□□□□□ -0.09
LRFN1Q9P244 AC133539.2-201ENST00000604757 467 ntBASIC14.46□□□□□ -0.09
LRFN1Q9P244 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.46□□□□□ -0.09
LRFN1Q9P244 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
LRFN1Q9P244 MTHFR-217ENST00000641820 1569 ntBASIC14.46□□□□□ -0.09
LRFN1Q9P244 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.46□□□□□ -0.1
LRFN1Q9P244 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.46□□□□□ -0.1
LRFN1Q9P244 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.46□□□□□ -0.1
LRFN1Q9P244 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
LRFN1Q9P244 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.1
LRFN1Q9P244 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.1
LRFN1Q9P244 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRFN1Q9P244 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LRFN1Q9P244 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
LRFN1Q9P244 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRFN1Q9P244 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
LRFN1Q9P244 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.45□□□□□ -0.1
LRFN1Q9P244 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 AL442647.2-201ENST00000429864 857 ntBASIC14.45□□□□□ -0.1
LRFN1Q9P244 ATP5G2P4-201ENST00000442175 420 ntBASIC14.45□□□□□ -0.1
LRFN1Q9P244 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 NORAD-201ENST00000565493 5339 ntBASIC14.45□□□□□ -0.1
LRFN1Q9P244 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 AC097359.3-201ENST00000603982 1210 ntBASIC14.45□□□□□ -0.1
LRFN1Q9P244 AL162274.1-201ENST00000617191 1098 ntBASIC14.45□□□□□ -0.1
LRFN1Q9P244 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
LRFN1Q9P244 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
LRFN1Q9P244 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.44□□□□□ -0.1
LRFN1Q9P244 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 PCDH8P1-201ENST00000428983 2773 ntBASIC14.44□□□□□ -0.1
LRFN1Q9P244 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 RPL13AP25-201ENST00000484130 612 ntBASIC14.44□□□□□ -0.1
LRFN1Q9P244 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 NOP2-220ENST00000545915 630 ntTSL 2 BASIC14.44□□□□□ -0.1
LRFN1Q9P244 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
LRFN1Q9P244 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms