Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AC136604.1-201ENST00000418535 575 ntBASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 TSSK5P-201ENST00000423978 907 ntBASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AC004890.2-204ENST00000481968 304 ntBASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 TIMM17BP1-201ENST00000545713 516 ntBASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AL512361.1-201ENST00000554200 418 ntBASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AL390955.2-201ENST00000603032 514 ntBASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AL355385.1-201ENST00000606123 409 ntBASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 AC074044.1-201ENST00000609673 707 ntBASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SDHAF3Q9NRP4 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 Z97205.2-201ENST00000564697 1639 ntBASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AC025048.3-201ENST00000590609 569 ntBASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AL844908.2-201ENST00000609461 460 ntBASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AC005702.4-201ENST00000618393 416 ntBASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 AJ011932.1-201ENST00000621707 465 ntBASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SDHAF3Q9NRP4 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms