Protein–RNA interactions for Protein: Q9NP50

FAM60A, Protein FAM60A, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM60AQ9NP50 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.9□□□□□ -0.02
FAM60AQ9NP50 AC092850.2-201ENST00000623821 2697 ntBASIC14.89□□□□□ -0.03
FAM60AQ9NP50 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 GK-202ENST00000378941 458 ntTSL 3 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 AL162726.2-201ENST00000438986 1017 ntBASIC14.89□□□□□ -0.03
FAM60AQ9NP50 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 AC007389.4-201ENST00000454674 793 ntBASIC14.89□□□□□ -0.03
FAM60AQ9NP50 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 AC026410.3-201ENST00000514280 936 ntBASIC14.89□□□□□ -0.03
FAM60AQ9NP50 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
FAM60AQ9NP50 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.88□□□□□ -0.03
FAM60AQ9NP50 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 SOCS2P1-201ENST00000417727 557 ntBASIC14.88□□□□□ -0.03
FAM60AQ9NP50 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 AC008735.3-201ENST00000596646 500 ntBASIC14.88□□□□□ -0.03
FAM60AQ9NP50 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 TNRC18P3-201ENST00000441896 2691 ntBASIC14.88□□□□□ -0.03
FAM60AQ9NP50 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.88□□□□□ -0.03
FAM60AQ9NP50 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
FAM60AQ9NP50 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms