Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 AP001282.1-201ENST00000531301 1499 ntBASIC15.14■□□□□ 0.01
PIF1Q9H611 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.14■□□□□ 0.01
PIF1Q9H611 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PIF1Q9H611 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PIF1Q9H611 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 VN2R19P-201ENST00000442399 1052 ntBASIC15.13■□□□□ 0.01
PIF1Q9H611 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.13■□□□□ 0.01
PIF1Q9H611 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 AC117489.1-201ENST00000625169 3217 ntBASIC15.13■□□□□ 0.01
PIF1Q9H611 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC15.13■□□□□ 0.01
PIF1Q9H611 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
PIF1Q9H611 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
PIF1Q9H611 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 TNN-203ENST00000622870 3719 ntTSL 5 BASIC15.13■□□□□ 0.01
PIF1Q9H611 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
PIF1Q9H611 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 PARN-202ENST00000420015 2360 ntTSL 2 BASIC15.12■□□□□ 0.01
PIF1Q9H611 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PIF1Q9H611 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC15.12■□□□□ 0.01
PIF1Q9H611 AGAP7P-201ENST00000582299 2062 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 AGAP14-201ENST00000624701 2060 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.12■□□□□ 0.01
PIF1Q9H611 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 CSF3-203ENST00000394148 622 ntTSL 3 BASIC15.12■□□□□ 0.01
PIF1Q9H611 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PIF1Q9H611 CRYGEP-201ENST00000412192 528 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 AC092474.2-201ENST00000424288 719 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 GPX1P2-201ENST00000429271 606 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 FIS1-203ENST00000442303 631 ntTSL 3 BASIC15.12■□□□□ 0.01
PIF1Q9H611 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.12■□□□□ 0.01
PIF1Q9H611 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 RNA5SP415-201ENST00000517246 115 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 UNC93B6-202ENST00000528242 690 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
PIF1Q9H611 AC002347.1-201ENST00000569543 541 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC15.12■□□□□ 0.01
PIF1Q9H611 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.12■□□□□ 0.01
PIF1Q9H611 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PIF1Q9H611 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 PMS2P7-201ENST00000506558 1336 ntBASIC15.12■□□□□ 0.01
PIF1Q9H611 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
PIF1Q9H611 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
PIF1Q9H611 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
PIF1Q9H611 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms