Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.57■□□□□ 0.4
CCSER1Q9C0I3 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 BTBD7P1-201ENST00000447253 1453 ntBASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 CYP2AB1P-202ENST00000454440 1456 ntBASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AC138969.3-201ENST00000546612 1459 ntBASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AC138932.2-201ENST00000548268 1459 ntBASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AC126755.4-201ENST00000549796 1459 ntBASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AC148477.4-201ENST00000613430 1793 ntBASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AL390955.2-201ENST00000603032 514 ntBASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AC004461.2-201ENST00000629517 803 ntBASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CCSER1Q9C0I3 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 HMGN1P19-201ENST00000436976 333 ntBASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 IGHV3-42-201ENST00000520410 361 ntBASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 RAB35-202ENST00000534951 939 ntTSL 2 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 AC093512.1-201ENST00000617969 520 ntBASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 AL121723.1-201ENST00000445194 1519 ntBASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC17.55■□□□□ 0.4
CCSER1Q9C0I3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms