Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AL139400.1-201ENST00000366220 510 ntBASIC14.54□□□□□ -0.08
TRIM2Q9C040 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AC093028.1-201ENST00000622998 982 ntBASIC14.54□□□□□ -0.08
TRIM2Q9C040 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AC138969.2-201ENST00000532739 9932 ntBASIC14.54□□□□□ -0.08
TRIM2Q9C040 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM2Q9C040 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM2Q9C040 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 AL627223.1-201ENST00000416693 442 ntBASIC14.53□□□□□ -0.08
TRIM2Q9C040 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 AC023141.5-201ENST00000458585 616 ntBASIC14.53□□□□□ -0.08
TRIM2Q9C040 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 AC018529.1-201ENST00000613063 361 ntBASIC14.53□□□□□ -0.08
TRIM2Q9C040 ORC5-208ENST00000626700 344 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM2Q9C040 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
TRIM2Q9C040 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms