Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 PPY2P-201ENST00000582808 702 ntBASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 NDUFV2P1-201ENST00000596415 907 ntBASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 AC015967.2-201ENST00000624092 234 ntBASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 AC006435.4-201ENST00000625037 234 ntBASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 AL356737.1-201ENST00000634391 234 ntBASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 AC138627.1-207ENST00000641560 1006 ntBASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PCDH11XQ9BZA7 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 ANKRD30BP2-201ENST00000435744 1610 ntBASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 ATP6V0CP2-201ENST00000469409 207 ntBASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 NCK2-206ENST00000522586 490 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 RERG-205ENST00000537647 935 ntTSL 2 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 MIR3619-201ENST00000579667 83 ntBASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 RN7SL713P-201ENST00000582127 302 ntBASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 AC073413.1-201ENST00000603927 732 ntBASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PCDH11XQ9BZA7 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 POM121L8P-201ENST00000417732 1281 ntBASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 POM121L9P-203ENST00000441984 1285 ntBASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 UPF3AP2-201ENST00000457924 1132 ntBASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 AC007663.3-201ENST00000609632 465 ntBASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDH11XQ9BZA7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 DEF8-202ENST00000418391 852 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 HNRNPA1P63-201ENST00000427917 963 ntBASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 AP003171.2-201ENST00000528208 925 ntBASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 AC079328.1-201ENST00000560358 952 ntBASIC20.09■□□□□ 0.81
PCDH11XQ9BZA7 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms