Protein–RNA interactions for Protein: Q9BUZ4

TRAF4, TNF receptor-associated factor 4, humanhuman

Predicted RBP Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4Q9BUZ4 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TRAF4Q9BUZ4 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 REXO1L2P-201ENST00000425429 2069 ntBASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 AC041040.2-201ENST00000622926 2899 ntBASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 AC097493.3-201ENST00000509725 367 ntBASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 MIR4453-201ENST00000584019 89 ntBASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 AC073389.1-201ENST00000595595 795 ntBASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
TRAF4Q9BUZ4 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 AC013726.1-201ENST00000563747 2285 ntBASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 TSPY16P-201ENST00000449843 468 ntBASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.15□□□□□ -0.14
TRAF4Q9BUZ4 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms