Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AKAP8P1-201ENST00000434743 1349 ntBASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 AL009178.2-201ENST00000597278 2719 ntBASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CHRDL1Q9BU40 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 CICP4-201ENST00000447359 2812 ntBASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 TFAMP1-201ENST00000412727 736 ntBASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 AL365330.1-201ENST00000607459 531 ntBASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 TMBIM7P-203ENST00000641617 1718 ntBASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.59□□□□□ -0.39
CHRDL1Q9BU40 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CHRDL1Q9BU40 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.58□□□□□ -0.39
CHRDL1Q9BU40 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
CHRDL1Q9BU40 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
CHRDL1Q9BU40 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 YBX2P1-201ENST00000394192 760 ntBASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 AC004832.2-201ENST00000426397 482 ntBASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 AP000347.1-202ENST00000435868 847 ntBASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC12.58□□□□□ -0.4
CHRDL1Q9BU40 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 147.9 ms