Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CA12-203ENST00000422263 2556 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 BANP-203ENST00000393207 2438 ntTSL 2 BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
UPK3BQ9BT76 DBET-201ENST00000630918 3363 ntBASIC11.03□□□□□ -0.64
UPK3BQ9BT76 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 WT1-209ENST00000530998 2421 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 AC004987.2-201ENST00000395959 1148 ntBASIC11.03□□□□□ -0.64
UPK3BQ9BT76 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 AC002472.2-201ENST00000442739 958 ntBASIC11.03□□□□□ -0.64
UPK3BQ9BT76 OARD1-208ENST00000469104 704 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 LINC02084-201ENST00000606069 1096 ntBASIC11.03□□□□□ -0.64
UPK3BQ9BT76 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 IMPDH1P4-201ENST00000445028 1534 ntBASIC11.03□□□□□ -0.64
UPK3BQ9BT76 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
UPK3BQ9BT76 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
UPK3BQ9BT76 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC11.02□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 187.6 ms