Protein–RNA interactions for Protein: Q9BQ75

CMSS1, Protein CMSS1, humanhuman

Known RBP Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1Q9BQ75 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.55□□□□□ -0.24
CMSS1Q9BQ75 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AC090616.6-203ENST00000579186 1945 ntBASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AC138969.2-201ENST00000532739 9932 ntBASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 HCG4B-203ENST00000450128 991 ntBASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AL773604.1-201ENST00000617417 272 ntBASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
CMSS1Q9BQ75 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 RHOQP3-201ENST00000437982 621 ntBASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
CMSS1Q9BQ75 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms