Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC10.65□□□□□ -0.7
LYSTQ99698 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC10.65□□□□□ -0.7
LYSTQ99698 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 CYP51A1P3-201ENST00000400072 1428 ntBASIC10.65□□□□□ -0.7
LYSTQ99698 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 DNAJB1P1-201ENST00000429417 1024 ntBASIC10.65□□□□□ -0.7
LYSTQ99698 AC106794.1-201ENST00000506935 792 ntBASIC10.65□□□□□ -0.7
LYSTQ99698 SYT17-208ENST00000568433 812 ntTSL 3 BASIC10.65□□□□□ -0.7
LYSTQ99698 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC10.65□□□□□ -0.7
LYSTQ99698 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC10.65□□□□□ -0.7
LYSTQ99698 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 LINC01144-201ENST00000626198 1710 ntBASIC10.65□□□□□ -0.7
LYSTQ99698 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LYSTQ99698 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC10.65□□□□□ -0.7
LYSTQ99698 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LYSTQ99698 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LYSTQ99698 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LYSTQ99698 AL118516.1-201ENST00000564152 670 ntBASIC10.65□□□□□ -0.71
LYSTQ99698 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LYSTQ99698 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LYSTQ99698 DGAT2L7P-201ENST00000602462 744 ntBASIC10.65□□□□□ -0.71
LYSTQ99698 AC007663.3-201ENST00000609632 465 ntBASIC10.65□□□□□ -0.71
LYSTQ99698 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC10.65□□□□□ -0.71
LYSTQ99698 AP001282.1-201ENST00000531301 1499 ntBASIC10.65□□□□□ -0.71
LYSTQ99698 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC10.65□□□□□ -0.71
LYSTQ99698 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC10.65□□□□□ -0.71
LYSTQ99698 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC10.65□□□□□ -0.71
LYSTQ99698 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LYSTQ99698 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
LYSTQ99698 FRMD6-AS1-201ENST00000617151 2229 ntBASIC10.65□□□□□ -0.71
LYSTQ99698 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC10.64□□□□□ -0.71
LYSTQ99698 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 AC019193.1-201ENST00000506678 823 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 MEG3_2.1-201ENST00000611456 105 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC10.64□□□□□ -0.71
LYSTQ99698 AC051619.9-201ENST00000623237 597 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.64□□□□□ -0.71
LYSTQ99698 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 AC009093.2-202ENST00000620513 2079 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 AC116345.2-201ENST00000512837 523 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC10.64□□□□□ -0.71
LYSTQ99698 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC10.64□□□□□ -0.71
LYSTQ99698 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC10.64□□□□□ -0.71
LYSTQ99698 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
LYSTQ99698 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC10.64□□□□□ -0.71
LYSTQ99698 OARD1-204ENST00000464633 717 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC10.64□□□□□ -0.71
LYSTQ99698 AL157792.1-201ENST00000488281 530 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 AP002803.1-201ENST00000528836 498 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC10.64□□□□□ -0.71
LYSTQ99698 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 AC007881.3-201ENST00000608897 607 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
LYSTQ99698 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 SLC9A7P1-202ENST00000556476 2239 ntBASIC10.64□□□□□ -0.71
LYSTQ99698 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
LYSTQ99698 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
LYSTQ99698 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC10.63□□□□□ -0.71
LYSTQ99698 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.63□□□□□ -0.71
LYSTQ99698 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC10.63□□□□□ -0.71
LYSTQ99698 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LYSTQ99698 PIGF-202ENST00000306465 1061 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
LYSTQ99698 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.63□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms