Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 FAM8A3P-201ENST00000427218 844 ntBASIC18.62■□□□□ 0.57
NEK1Q96PY6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 TSPY26P-202ENST00000565928 3884 ntBASIC18.62■□□□□ 0.57
NEK1Q96PY6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 AC023157.3-201ENST00000619086 2088 ntBASIC18.62■□□□□ 0.57
NEK1Q96PY6 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
NEK1Q96PY6 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
NEK1Q96PY6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 NME2-201ENST00000393183 568 ntTSL 2 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC18.61■□□□□ 0.57
NEK1Q96PY6 RPL13P2-201ENST00000440687 659 ntBASIC18.61■□□□□ 0.57
NEK1Q96PY6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 HNRNPA3P5-201ENST00000455201 833 ntBASIC18.61■□□□□ 0.57
NEK1Q96PY6 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 SLED1-202ENST00000512051 380 ntBASIC18.61■□□□□ 0.57
NEK1Q96PY6 LINC01115-203ENST00000606068 577 ntBASIC18.61■□□□□ 0.57
NEK1Q96PY6 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 AL109936.8-201ENST00000641772 604 ntBASIC18.61■□□□□ 0.57
NEK1Q96PY6 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NEK1Q96PY6 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC18.61■□□□□ 0.57
NEK1Q96PY6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
NEK1Q96PY6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 TSSK5P-201ENST00000423978 907 ntBASIC18.6■□□□□ 0.57
NEK1Q96PY6 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.6■□□□□ 0.57
NEK1Q96PY6 SDHAP3-202ENST00000515467 728 ntBASIC18.6■□□□□ 0.57
NEK1Q96PY6 AC044860.1-202ENST00000559481 777 ntBASIC18.6■□□□□ 0.57
NEK1Q96PY6 AC011467.4-201ENST00000594891 528 ntBASIC18.6■□□□□ 0.57
NEK1Q96PY6 AC074044.1-201ENST00000609673 707 ntBASIC18.6■□□□□ 0.57
NEK1Q96PY6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms