Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 AC092135.3-201ENST00000624151 1846 ntBASIC13.58□□□□□ -0.24
CMTM3Q96MX0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 AC092474.2-201ENST00000424288 719 ntBASIC13.58□□□□□ -0.24
CMTM3Q96MX0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 OR7E47P-204ENST00000575924 449 ntBASIC13.58□□□□□ -0.24
CMTM3Q96MX0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
CMTM3Q96MX0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AC027601.5-201ENST00000624065 2482 ntBASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AL161772.1-201ENST00000610494 4412 ntBASIC13.57□□□□□ -0.24
CMTM3Q96MX0 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 TRIB2-202ENST00000381465 2778 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AC113367.3-201ENST00000508316 1912 ntBASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AC097376.2-205ENST00000610159 5334 ntBASIC13.57□□□□□ -0.24
CMTM3Q96MX0 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 MED22-202ENST00000371999 987 ntTSL 3 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AL009183.1-201ENST00000603760 355 ntBASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AC008608.2-201ENST00000606089 416 ntBASIC13.57□□□□□ -0.24
CMTM3Q96MX0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AC005252.3-201ENST00000623855 2258 ntBASIC13.57□□□□□ -0.24
CMTM3Q96MX0 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 ABR-228ENST00000574437 3196 ntTSL 5 BASIC13.57□□□□□ -0.24
CMTM3Q96MX0 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms