Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 MROH4P-201ENST00000431302 1578 ntBASIC13.71□□□□□ -0.21
CCDC107Q8WV48 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 PARN-202ENST00000420015 2360 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 IGLL3P-201ENST00000412472 434 ntBASIC13.71□□□□□ -0.21
CCDC107Q8WV48 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CCDC107Q8WV48 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC13.71□□□□□ -0.22
CCDC107Q8WV48 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 PMS2P4-201ENST00000412466 1052 ntBASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AC009078.2-202ENST00000463353 338 ntBASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AC010507.1-201ENST00000633895 436 ntBASIC13.7□□□□□ -0.22
CCDC107Q8WV48 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 CICP4-201ENST00000447359 2812 ntBASIC13.7□□□□□ -0.22
CCDC107Q8WV48 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.7□□□□□ -0.22
CCDC107Q8WV48 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 AC008677.1-201ENST00000519230 1561 ntBASIC13.7□□□□□ -0.22
CCDC107Q8WV48 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.7□□□□□ -0.22
CCDC107Q8WV48 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms