Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 AC023141.5-201ENST00000458585 616 ntBASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 AC093520.2-201ENST00000561830 333 ntBASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 AC105021.1-202ENST00000570572 669 ntBASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 MIR4313-201ENST00000580760 101 ntBASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 AC105250.1-201ENST00000509378 2057 ntBASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TRAF3IP1Q8TDR0 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 AC013268.4-201ENST00000637413 2228 ntBASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 SBF1P1-201ENST00000444527 5631 ntBASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 AC009093.7-201ENST00000623853 1223 ntBASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.46■□□□□ 0.23
TRAF3IP1Q8TDR0 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
TRAF3IP1Q8TDR0 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.46■□□□□ 0.22
TRAF3IP1Q8TDR0 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAF3IP1Q8TDR0 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.22
TRAF3IP1Q8TDR0 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.46■□□□□ 0.22
TRAF3IP1Q8TDR0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 AC090616.6-203ENST00000579186 1945 ntBASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 API5-202ENST00000420461 2009 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 EEF1DP4-201ENST00000446006 880 ntBASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 AC026150.2-201ENST00000564693 1156 ntBASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 MIR6080-201ENST00000617359 66 ntBASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TRAF3IP1Q8TDR0 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.45■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms