Protein–RNA interactions for Protein: Q8NEV1

CSNK2A3, Casein kinase II subunit alpha 3, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A3Q8NEV1 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 SSR4P1-203ENST00000599569 2260 ntBASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 AL353705.2-201ENST00000428243 662 ntBASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 AP000347.1-202ENST00000435868 847 ntBASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
CSNK2A3Q8NEV1 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 STOM-202ENST00000347359 870 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 UPF3AP3-201ENST00000420996 769 ntBASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 MDH2-205ENST00000461263 648 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 NAA38-207ENST00000576861 556 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AC004835.2-201ENST00000603762 682 ntBASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
CSNK2A3Q8NEV1 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms