Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 NEU3-203ENST00000529024 581 ntTSL 3 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 AC092552.1-201ENST00000547243 906 ntBASIC16.06■□□□□ 0.16
KDM1BQ8NB78 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 WASH4P-201ENST00000564273 1246 ntBASIC16.06■□□□□ 0.16
KDM1BQ8NB78 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.06■□□□□ 0.16
KDM1BQ8NB78 PRAL-201ENST00000624952 3286 ntBASIC16.06■□□□□ 0.16
KDM1BQ8NB78 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 AL513477.1-201ENST00000602865 2407 ntBASIC16.06■□□□□ 0.16
KDM1BQ8NB78 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.06■□□□□ 0.16
KDM1BQ8NB78 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 AL512384.1-201ENST00000406683 331 ntBASIC16.05■□□□□ 0.16
KDM1BQ8NB78 AL442647.2-201ENST00000429864 857 ntBASIC16.05■□□□□ 0.16
KDM1BQ8NB78 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.05■□□□□ 0.16
KDM1BQ8NB78 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 GK-202ENST00000378941 458 ntTSL 3 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 AC098850.1-201ENST00000419919 790 ntBASIC16.04■□□□□ 0.16
KDM1BQ8NB78 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 INE1-201ENST00000456273 945 ntBASIC16.04■□□□□ 0.16
KDM1BQ8NB78 GIMAP3P-201ENST00000495150 836 ntBASIC16.04■□□□□ 0.16
KDM1BQ8NB78 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 CTBP2P3-201ENST00000585629 1255 ntBASIC16.04■□□□□ 0.16
KDM1BQ8NB78 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
KDM1BQ8NB78 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms