Protein–RNA interactions for Protein: Q8N1G4

LRRC47, Leucine-rich repeat-containing protein 47, humanhuman

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC47Q8N1G4 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 AC018665.1-201ENST00000622927 1362 ntBASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 CLUHP6-201ENST00000580789 941 ntBASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 AL512343.1-201ENST00000605837 169 ntBASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 AC005252.2-201ENST00000624630 1141 ntBASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 MSTO2P-201ENST00000314835 1709 ntBASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 ILF3-AS1-201ENST00000591501 1983 ntBASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 USE1-206ENST00000595101 1776 ntTSL 2 BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LRRC47Q8N1G4 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 MIR1909-201ENST00000411312 80 ntBASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 HIST1H2BPS3-201ENST00000419683 341 ntBASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 AC007274.1-201ENST00000439805 662 ntBASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 AC026410.3-201ENST00000514280 936 ntBASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 AC106886.1-201ENST00000568660 600 ntBASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC18.21■□□□□ 0.51
LRRC47Q8N1G4 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 AC009090.5-201ENST00000624886 2285 ntBASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SLC25A47P1-201ENST00000531577 414 ntBASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SNX29P1-201ENST00000548357 1007 ntBASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 BTNL10-201ENST00000595971 695 ntBASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 AL359881.2-201ENST00000602973 570 ntBASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 AC017083.2-201ENST00000608069 979 ntBASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LRRC47Q8N1G4 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms