Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SNX1-214ENST00000625244 324 ntTSL 5 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 MST1L-201ENST00000442552 2185 ntBASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 AC004899.1-201ENST00000424687 1714 ntBASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
COL27A1Q8IZC6 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 MPV17-204ENST00000399052 749 ntTSL 4 BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 FTLP1-201ENST00000449155 526 ntBASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 INO80C-210ENST00000590757 595 ntTSL 2 BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 AC132192.2-201ENST00000596206 1147 ntBASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 AD000864.1-201ENST00000624076 2295 ntBASIC14.46□□□□□ -0.1
COL27A1Q8IZC6 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 SLC16A6P1-201ENST00000413214 1059 ntBASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 AC024681.1-201ENST00000521917 487 ntBASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 RNF165-205ENST00000588679 2904 ntBASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 AC009093.2-202ENST00000620513 2079 ntBASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 INE2-201ENST00000630399 1874 ntBASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
COL27A1Q8IZC6 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 RBM38-204ENST00000371219 760 ntTSL 2 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 AC010141.1-201ENST00000411585 623 ntBASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 AL596276.2-201ENST00000447525 331 ntBASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 HLA-J-204ENST00000495278 958 ntBASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 NKILA-202ENST00000614771 2598 ntBASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 AL157414.3-201ENST00000624276 1954 ntBASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
COL27A1Q8IZC6 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms