Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AL353705.2-201ENST00000428243 662 ntBASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 RBPMS2P1-201ENST00000437762 623 ntBASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AC112482.1-201ENST00000492080 688 ntBASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 YBX1P5-201ENST00000509441 847 ntBASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 AC003101.2-201ENST00000612557 442 ntBASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 C18orf15-201ENST00000623680 2534 ntBASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 TNRC18P2-201ENST00000417666 2714 ntBASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LINC00346Q8IVM7 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 COA5-202ENST00000409997 557 ntTSL 4 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 AZGP1P1-201ENST00000411909 902 ntBASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 LINC02228-204ENST00000642115 2962 ntBASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 AC112693.3-201ENST00000624819 1983 ntBASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LINC00346Q8IVM7 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 RPSAP43-201ENST00000402237 625 ntBASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.97□□□□□ -0.17
LINC00346Q8IVM7 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms