Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 AC140658.5-201ENST00000438532 169 ntBASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 FAM215A-202ENST00000632077 792 ntBASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 AC007064.4-201ENST00000637740 555 ntBASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
NUDCD3Q8IVD9 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC15.71■□□□□ 0.1
NUDCD3Q8IVD9 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
NUDCD3Q8IVD9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.1
NUDCD3Q8IVD9 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC15.71■□□□□ 0.1
NUDCD3Q8IVD9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.1
NUDCD3Q8IVD9 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 GOLGA2P9-201ENST00000596977 1937 ntBASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 RHOQP3-201ENST00000437982 621 ntBASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 HCG4B-203ENST00000450128 991 ntBASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 AC023141.13-201ENST00000604991 943 ntBASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 AC148477.8-201ENST00000624298 468 ntBASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 AC010507.1-201ENST00000633895 436 ntBASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC15.7■□□□□ 0.1
NUDCD3Q8IVD9 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NUDCD3Q8IVD9 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms