Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CRLF3Q8IUI8 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 KRT19P2-202ENST00000557173 1012 ntBASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 AGAP7P-201ENST00000582299 2062 ntBASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 GPI-205ENST00000586425 1799 ntTSL 5 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 AC005089.1-201ENST00000619486 2241 ntBASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 AGAP14-201ENST00000624701 2060 ntBASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC15.81■□□□□ 0.12
CRLF3Q8IUI8 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 AC013726.1-201ENST00000563747 2285 ntBASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 AC025580.3-201ENST00000617932 1424 ntBASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 RPS8P6-201ENST00000426177 609 ntBASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 ALG1L5P-201ENST00000482043 771 ntBASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 PDPK2P-202ENST00000562415 1191 ntBASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CRLF3Q8IUI8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.79■□□□□ 0.12
CRLF3Q8IUI8 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms