Protein–RNA interactions for Protein: Q7Z3J3

RGPD4, RanBP2-like and GRIP domain-containing protein 4, humanhuman

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD4Q7Z3J3 SCARNA21-201ENST00000517026 139 ntBASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 AC011247.3-201ENST00000603297 438 ntBASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 AC005041.3-201ENST00000606287 649 ntBASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 AC084364.1-201ENST00000551967 1556 ntBASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 AC011840.2-201ENST00000563063 1520 ntBASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
RGPD4Q7Z3J3 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 FRMD4A-208ENST00000493380 1149 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 AC027139.1-201ENST00000565286 951 ntBASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 LINC01815-202ENST00000641468 1409 ntBASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 DDX39AP1-201ENST00000445147 1181 ntBASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 PLS3-210ENST00000626746 216 ntTSL 4 BASIC19.29■□□□□ 0.68
RGPD4Q7Z3J3 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 HIST2H2BA-201ENST00000412169 381 ntBASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 AL606748.1-201ENST00000423919 655 ntTSL 3 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 AC006122.1-201ENST00000493323 440 ntBASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 AC011481.2-201ENST00000585408 426 ntTSL 3 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 HKR1-225ENST00000592168 566 ntTSL 4 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 AC006449.6-201ENST00000612330 2296 ntBASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 KRT18P9-201ENST00000604826 1300 ntBASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 LINC01165-201ENST00000445190 1623 ntBASIC19.28■□□□□ 0.68
RGPD4Q7Z3J3 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 PMF1-202ENST00000368277 1068 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 AC092638.2-201ENST00000441105 947 ntBASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 MIR3188-201ENST00000583494 85 ntBASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 AC007613.1-201ENST00000572811 2597 ntBASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 IL9RP3-201ENST00000442856 1674 ntBASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 AC006058.4-201ENST00000624016 1670 ntBASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RGPD4Q7Z3J3 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RGPD4Q7Z3J3 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RGPD4Q7Z3J3 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC19.27■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms