Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SHFQ7M4L6 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.31□□□□□ -0.12
SHFQ7M4L6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC14.31□□□□□ -0.12
SHFQ7M4L6 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 UCKL1-AS1-201ENST00000623569 3602 ntBASIC14.3□□□□□ -0.12
SHFQ7M4L6 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 AC117489.1-201ENST00000625169 3217 ntBASIC14.3□□□□□ -0.12
SHFQ7M4L6 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SHFQ7M4L6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SHFQ7M4L6 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AC007292.2-201ENST00000593524 1812 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AL359258.3-201ENST00000622910 2331 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AC002056.1-201ENST00000395613 760 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 KRT126P-201ENST00000549467 1181 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 KRT19P2-202ENST00000557173 1012 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 AC145285.3-201ENST00000564603 959 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 SLC25A6P4-201ENST00000586535 553 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AC064836.3-201ENST00000607928 673 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC14.29□□□□□ -0.12
SHFQ7M4L6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
SHFQ7M4L6 AC127383.1-201ENST00000444697 1800 ntBASIC14.29□□□□□ -0.12
SHFQ7M4L6 LINC01101-201ENST00000622953 1884 ntBASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms