Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 CYP46A4P-201ENST00000414953 267 ntBASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 HINT2P1-201ENST00000419438 481 ntBASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 AC044849.1-201ENST00000519737 1188 ntBASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CNKSR3Q6P9H4 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNKSR3Q6P9H4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNKSR3Q6P9H4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.26
CNKSR3Q6P9H4 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 KRT8P14-201ENST00000414254 1442 ntBASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 NKAIN1P1-201ENST00000435754 582 ntBASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 AC245884.6-201ENST00000515672 1067 ntBASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 RN7SL713P-201ENST00000582127 302 ntBASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 FBXL12-212ENST00000592067 879 ntTSL 2 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 ZACNP1-201ENST00000612259 710 ntBASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 CU633904.3-201ENST00000624042 1029 ntBASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC16.7■□□□□ 0.26
CNKSR3Q6P9H4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 FXNP2-201ENST00000411625 547 ntBASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 IMP3P2-201ENST00000489760 475 ntBASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 AC097724.1-201ENST00000609581 426 ntBASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CNKSR3Q6P9H4 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms